Cancer-miRNA
Regulatory Network
Compendium of
miRNA Target Genes
Download FIRM Citation

CA Colon Graudens Cluster Number 5 (86 genes)
This page contains all miRNA mediated regulation and functional enrichment for CA Colon Graudens cluster number 5. Information about colon cancer can be found on Wikipedia, and further information about the "CA Colon Graudens" dataset can be found in Graudens et al., 2006.
Inferred miRNA Mediated Regulation
Weeder-miRvestigator PITA TargetScan
zzz999 zzz999 hsa-mir-548h
Gene Ontology Enrichment
GO ID GO Term Annotated Genes in Cluster
GO:0000375 RNA splicing, via transesterification reactions 7
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 7
GO:0000398 nuclear mRNA splicing, via spliceosome 7
GO:0016071 mRNA metabolic process 13
Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations
miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value
hsa-mir-548h TargetScan GO:0000375 RNA splicing, via transesterification reactions 1 7 86 9 0.1553168
hsa-mir-548h TargetScan GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1 7 86 9 0.1553168
hsa-mir-548h TargetScan GO:0000398 nuclear mRNA splicing, via spliceosome 1 7 86 9 0.1553168
hsa-mir-548h TargetScan GO:0016071 mRNA metabolic process 1 13 86 9 0.4088815

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL